The “After the Rainstorm” Smell

By: Sara Knight
BU News Service

After a rainstorm, you step outside to a world transformed. Colors have become darker and more vibrant while everything else seems muted – the normal chitter and chatter of wildlife becomes conspicuous in its absence. Earthworms, normally hidden safe in the soil, suddenly litter the ground, lying bloated and still on the sidewalks. But the most striking transformation is the smell – that earthy, pungent scent is as pervasive as it is unmistakable.

If you look at this picture, you can almost smell it:

Image from Wikimedia Commons.
Image from Wikimedia Commons.

The smell itself actually has a name: petrichor, which is a combination of “petri-,” a Greek base meaning “stone,” and “ichor,” an ethereal fluid that served as blood for Greek gods and immortals. But where does this inimitable smell come from?

It’s a combination of plant oils and the waste product of a soil-loving bacteria in the Streptomyces genus. The oil in question is produced by plants during dry periods – ostensibly as a sort of birth control until more water is available, as it postpones seed germination.

The other culprit, the bacterial waste, is a compound called geosmin. Streptomyces bacteria are important decomposers; as they break down rotting vegetation and other organic material in soil they produce geosmin as a by-product. Geosmin is also behind the earthy taste of beets and the muddy smell of catfish.

During rainfall, the plant oil and geosmin are bled out of their hiding places and released into the air, creating that wonderful distinctive scent.

Fish Depth May Affect Mercury Content

A fish auction in Hawaii sells  local a local shallow swimmer called moonfish, or Opah. (Photo: C. Anela Choy).
A fish auction in Hawaii sells local a local shallow swimmer called moonfish, or Opah. (Photo: C. Anela Choy).

By Poncie Rutsch
BU News Service

For years, scientists have noticed that fish swimming the deep seas contain more mercury than their shallow swimming friends. Now, a recent study from the University of Michigan and the University of Hawaii shows why that discrepancy exists.

The researchers collected nine different fish species and measured the mercury accumulated in the fish tissue. The fish they collected ranged from a lanternfish, which swims as deep as five thousand feet below the surface, to flying fish, which leap out of the water and glide through the air.

Researchers used a large net to catch the nine species of fish tested for mercury in the study.  The net weighs 2000 pounds when it's dry, and consists of different bundles that can be selectively opened to catch fish at specific depths. (Photo: Jeff Drazen).
Researchers used a large net to catch the nine species of fish tested for mercury in the study. The net weighs 2000 pounds when it’s dry, and consists of different bundles that can be selectively opened to catch fish at specific depths. (Photo: Jeff Drazen).

The researchers used isotope analysis to determine what kinds of chemical reactions the mercury had undergone. They found that sunlight may help mercury to degrade and published their findings in Nature Geoscience at the end of August.

Fish eat mercury every day when they consume sea plants containing mercury-consuming bacteria. In a pristine environment, their mercury levels remain constant. But because of human activity, fish mercury levels have increased in the past hundred years.

Scientists worried about mercury in fish for decades and have been studying its origins. Mercury in the atmosphere exists in a vaporous, inorganic state that does not cause significant damage to humans. It settles on the sea’s surface, and collects on sea plants. Here tiny microbes digest the mercury and convert it to methylmercury, or organic mercury, which impairs human brain development. The microbes can convert mercury as deep as two thousand feet below the surface. Fish eat the sea plants with methylmercury accruing microbes, and the mercury accumulates in their tissue.

Because the mercury from each source undergoes different chemical reactions, each has a different chemical fingerprint. This makes it fairly easy for scientists to trace mercury in the atmosphere back to its source. The researchers started with the mercury in fish tissue and determined each reaction that had happened to it on its way to the fish.

Although mercury can cause significant damage to developing human brains, lead author Joel Blum said that the increasing mercury doesn’t seem to harm the fish themselves. “Yet,” he said, “if mercury levels double, will there even be fish?”

Previous research linked the mercury in Pacific fish to coal-fired power plants in Asia. According to co-author Brian Popp, mercury levels in Pacific fish are on the rise as Asian manufacturing continues to increase.

“But in the Atlantic,” Popp said, “we see the opposite, probably because of new regulations in North America and Europe.”

The research connects the mercury cycle to the fish we eat. Popp and Blum agree that because even tiny amounts of mercury can cause so much damage, understanding the cycle is vital for choosing which fish to eat and which to avoid.